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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797458.1_cds_XP_016455286.1_4878
CDS Infomation

[gene=LOC107779371] [db_xref=GeneID:107779371] [protein=aspartic proteinase nepenthesin-2-like] [protein_id=XP_016455286.1] [location=complement(19656..21041)] [gbkey=CDS]
Sequence

ATGGCTTCTTCTTGCTGTTTTCTCCTTCTTCTCTCTTTGTTTCCTCTCCTCTTTCCCTTC
GTATCTTCATCAACCTCCACATCTACCATTCCACTCTCACTTTTTAACACAAACCCATCT
CAAGATTTATACGAAAAGCTCACACATTTAGCTTCCATTTCCTTAGCCAGAGCAAATTAT
ATTAAAAAATCCCAAGATTCTTCAGTTTCAACAACCCCTTTATACCCTCATAGCTATGGA
GGCTACTGTATTACACTTGGCTTTGGTACACCTCCTCAGAAAATTCCTTTCATTATGGAC
ACTGGCAGTAACTTTGTTTGGTTTCCTTGTACAACAAAGTACTTATGTAAAAACTGTCCT
GTTTCTTCCTCTAGCTCACAATCAATTCCCACATTCATTCCCAAATCATCATCTACTGCT
AGAGTTGTTGGTTGTTTGAATCCAAAATGTGGTTGGATTCATACCAAGACTAATCCAAAA
TCACGTTGTCAAGATTGCCGGTCACCCACTGGAGCAAACTGTAAACAAATCTGTCCACCA
TATATAATTCTATATGGCTCAGGTTCTACAGGGGGACTTGCTCTTGTTGAAACTCTTGAT
ATGTCTTCTAACAAGAAAATACCTAATTTTCTTGTGGGCTGTTCTATGTTTTCTTCTCAA
CAACCTGCTGGAATTGCTGGTTTAGGCCGTGGACTTACATCATTGCCAAGTCAATTAGGT
GTTAAAAAATTCTCTTATTGTCTTGTTTCACATAGGTTTGATGACACTGGTAAAAGTAGC
AATCTTGTTTTGGATTTCAAAGCTGAAAAGTCTGCAAATTTAAGCTATACCCCACTGCTT
AAAAATCCTGTGGTGGCTGGTAAAAATGCGTTATCAGTGTACTATTATGTTGGTCTTAGG
AAAATCACAGTTGGAGGGCAGAAAGTGAAGATTCCGTACAAGTATTTGACACCTGATTCT
AATGGAAATGGTGGGAGTATCGTGGATTCAGGCACAACTTTCACATACATGAATCGTGGC
GTTTTCGAGCCTCTGCTTAATGCATTTGTGAACCAAGTTAAGGGTATTTCAAGAACTGAG
GGTATTGAGAAATTAACAGGCTTAAGGCCATGTTTCAATATTTCCAGCCACAAAACAGTG
TTTTTGCCAGAGCTTAAGTTTCATTTCAAAGGTGGTTTAGAGATGGCATTGCCATTGGCA
AATTACTTCTCTATTGCAGGTGAAAATGATGTGATTTGTTTAACTATGATCACAGATAGT
GTTTTAGGCCCGGAGTTGTCAACTGGTCCATCGATAATTCTGGGGAATTTTCAGATGCAG
AACTTCTTTGTTGAATTTGATCTCAGAAATGAAAAGTTAGGATTCAGGCATCAAGTATGC
AATTGA

Peptide Sequence

PEP ID

XP_016455286.1
PEP Infomation

PREDICTED: aspartic proteinase nepenthesin-2-like [Nicotiana tabacum]
Sequence

MASSCCFLLLLSLFPLLFPFVSSSTSTSTIPLSLFNTNPSQDLYEKLTHLASISLARANY
IKKSQDSSVSTTPLYPHSYGGYCITLGFGTPPQKIPFIMDTGSNFVWFPCTTKYLCKNCP
VSSSSSQSIPTFIPKSSSTARVVGCLNPKCGWIHTKTNPKSRCQDCRSPTGANCKQICPP
YIILYGSGSTGGLALVETLDMSSNKKIPNFLVGCSMFSSQQPAGIAGLGRGLTSLPSQLG
VKKFSYCLVSHRFDDTGKSSNLVLDFKAEKSANLSYTPLLKNPVVAGKNALSVYYYVGLR
KITVGGQKVKIPYKYLTPDSNGNGGSIVDSGTTFTYMNRGVFEPLLNAFVNQVKGISRTE
GIEKLTGLRPCFNISSHKTVFLPELKFHFKGGLEMALPLANYFSIAGENDVICLTMITDS
VLGPELSTGPSIILGNFQMQNFFVEFDLRNEKLGFRHQVCN

Transcript Sequence

Gene sequence data has not been registered.